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HPCA
2009
IEEE
14 years 8 months ago
Design and implementation of software-managed caches for multicores with local memory
Heterogeneous multicores, such as Cell BE processors and GPGPUs, typically do not have caches for their accelerator cores because coherence traffic, cache misses, and latencies fr...
Sangmin Seo, Jaejin Lee, Zehra Sura
BMCBI
2004
139views more  BMCBI 2004»
13 years 7 months ago
mlstdbNet - distributed multi-locus sequence typing (MLST) databases
Background: Multi-locus sequence typing (MLST) is a method of typing that facilitates the discrimination of microbial isolates by comparing the sequences of housekeeping gene frag...
Keith A. Jolley, Man-Suen Chan, Martin C. J. Maide...
BMCBI
2010
175views more  BMCBI 2010»
13 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
IPPS
1995
IEEE
13 years 11 months ago
Operating system support for concurrent remote task creation
This paper describes improvements to the Mach microkernel’s support for efficient application startup across multiple nodes in a cluster or massively parallel processor. Signifi...
Dejan S. Milojicic, David L. Black, Steven J. Sear...
ICPPW
2005
IEEE
14 years 1 months ago
Gene Sequence Alignment on a Public Computing Platform
Public computing can potentially supply not only computational power but also memory and short term storage resources to grid and cluster scale problems. Gene sequence alignment i...
Stephen Pellicer, Nova Ahmed, Yi Pan, Yao Zheng