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IPPS
2010
IEEE
13 years 6 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
PVM
2005
Springer
14 years 1 months ago
New User-Guided and ckpt-Based Checkpointing Libraries for Parallel MPI Applications
We present design and implementation details as well as performance results for two new parallel checkpointing libraries developed by us for parallel MPI applications. The first o...
Pawel Czarnul, Marcin Fraczak
IPPS
1996
IEEE
14 years 6 days ago
Experience with Parallel Computing on the AN2 Network
Technology trends make it attractive to use workstations connected by a local area network as a multicomputing platform for parallel applications. Achieving acceptable application...
Daniel J. Scales, Michael Burrows, Chandramohan A....
DSD
2008
IEEE
165views Hardware» more  DSD 2008»
14 years 2 months ago
Application Analysis for Parallel Processing
Effective mapping of multimedia applications on massively parallel embedded systems is a challenging demand in the domain of compiler design. The software implementations of emerg...
Muhammad Rashid, Damien Picard, Bernard Pottier
BIBM
2009
IEEE
218views Bioinformatics» more  BIBM 2009»
14 years 2 months ago
Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture
Abstract—Unacceptable execution time of Non-rigid registration (NRR) often presents a major obstacle to its routine clinical use. Parallel computing is an effective way to accele...
Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chri...