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BMCBI
2005
190views more  BMCBI 2005»
13 years 7 months ago
Species-specific analysis of protein sequence motifs using mutual information
Background: Protein sequence motifs are by definition short fragments of conserved amino acids, often associated with a specific function. Accordingly protein sequence profiles de...
Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joac...
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
FACT - a framework for the functional interpretation of high-throughput experiments
Background: Interpreting the results of high-throughput experiments, such as those obtained from DNA-microarrays, is an often time-consuming task due to the high number of data-po...
Felix Kokocinski, Nicolas Delhomme, Gunnar Wrobel,...
TON
2008
103views more  TON 2008»
13 years 7 months ago
On the race of worms, alerts, and patches
We study the effectiveness of automatic patching and quantify the speed of patch or alert dissemination required for worm containment. We focus on random scanning as this is repres...
Milan Vojnovic, Ayalvadi J. Ganesh
TOSEM
2008
168views more  TOSEM 2008»
13 years 7 months ago
Developing and debugging algebraic specifications for Java classes
Modern programs make extensive use of reusable software libraries. For example, a study of a number of large Java applications shows that between 17% and 30% of the classes in tho...
Johannes Henkel, Christoph Reichenbach, Amer Diwan
JSS
2007
105views more  JSS 2007»
13 years 7 months ago
Composing pattern-based components and verifying correctness
Designing large software systems out of reusable components has become increasingly popular. Although liberal composition of reusable components saves time and expense, many exper...
Jing Dong, Paulo S. C. Alencar, Donald D. Cowan, S...
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