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BMCBI
2004
158views more  BMCBI 2004»
13 years 7 months ago
Improvement of alignment accuracy utilizing sequentially conserved motifs
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand,...
ICFP
2001
ACM
14 years 7 months ago
Functioning without Closure: Type-Safe Customized Function Representations for Standard ML
The CIL compiler for core Standard ML compiles whole ML programs using a novel typed intermediate language that supports the generation of type-safe customized data representation...
Allyn Dimock, Ian Westmacott, Robert Muller, Frank...
SAC
2006
ACM
13 years 7 months ago
Efficient interactive configuration of unbounded modular systems
Interactive configuration guides a user searching through a large combinatorial space of solutions to a system of constraints. We investigate a class of very expressive underlying...
Erik Roland van der Meer, Andrzej Wasowski, Henrik...
PPOPP
2009
ACM
14 years 8 months ago
Safe open-nested transactions through ownership
Researchers in transactional memory (TM) have proposed open nesting as a methodology for increasing the concurrency of transactional programs. The idea is to ignore "low-leve...
Kunal Agrawal, I.-Ting Angelina Lee, Jim Sukha
PVLDB
2008
126views more  PVLDB 2008»
13 years 7 months ago
Parallelizing query optimization
Many commercial RDBMSs employ cost-based query optimization exploiting dynamic programming (DP) to efficiently generate the optimal query execution plan. However, optimization tim...
Wook-Shin Han, Wooseong Kwak, Jinsoo Lee, Guy M. L...