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BMCBI
2006
92views more  BMCBI 2006»
13 years 7 months ago
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
Background: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequen...
Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, ...
KDD
1994
ACM
125views Data Mining» more  KDD 1994»
13 years 11 months ago
Knowledge Discovery in Large Image Databases: Dealing with Uncertainties in Ground Truth
This paper discusses the problem of knowledge discovery in image databases with particular focus on the issues which arise when absolute ground truth is not available. It is often...
Padhraic Smyth, Michael C. Burl, Usama M. Fayyad, ...
ISMB
2000
13 years 9 months ago
Pattern Recognition of Genomic Features with Microarrays: Site Typing of Mycobacterium Tuberculosis Strains
Mycobacterium tuberculosis (M. tb.) strains differ in the number and locations of a transposon-like insertion sequence known as IS6110. Accurate detection of this sequence can be ...
Soumya Raychaudhuri, Joshua M. Stuart, Xuemin Liu,...
APCCM
2006
13 years 9 months ago
Network data mining: methods and techniques for discovering deep linkage between attributes
Network Data Mining identifies emergent networks between myriads of individual data items and utilises special algorithms that aid visualisation of `emergent' patterns and tre...
John Galloway, Simeon J. Simoff
BMCBI
2010
134views more  BMCBI 2010»
13 years 7 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...