We address the problem of detecting consensus motifs, that occur with subtle variations, across multiple sequences. These are usually functional domains in DNA sequences such as t...
We introduce the notion of a multiprofile and use it for finding subtle motifs in DNA sequences. Multiprofiles generalize the notion of a profile and allow one to detect subtle co...
Background: Detection of short, subtle conserved motif regions within a set of related DNA or amino acid sequences can lead to discoveries about important regulatory domains such ...
The problemofmultipleglobalcomparisonin familiesof biologicalsequences has been wellstudied. Fewer algorithms have been developed for identifying local consensus patterns or motif...
Yuh-Jyh Hu, Suzanne B. Sandmeyer, Dennis F. Kibler