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» Development of Correct Graph Transformation Systems
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BICOB
2009
Springer
14 years 3 months ago
Assembly of Large Genomes from Paired Short Reads
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...
BMCBI
2010
147views more  BMCBI 2010»
13 years 8 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...
POPL
2011
ACM
12 years 11 months ago
Dynamic inference of static types for ruby
There have been several efforts to bring static type inference to object-oriented dynamic languages such as Ruby, Python, and Perl. In our experience, however, such type inference...
Jong-hoon (David) An, Avik Chaudhuri, Jeffrey S. F...
CVPR
2008
IEEE
14 years 10 months ago
Automatic registration of aerial imagery with untextured 3D LiDAR models
A fast 3D model reconstruction methodology is desirable in many applications such as urban planning, training, and simulations. In this paper, we develop an automated algorithm fo...
Min Ding, Kristian Lyngbaek, Avideh Zakhor
PVM
2010
Springer
13 years 7 months ago
Toward Performance Models of MPI Implementations for Understanding Application Scaling Issues
Abstract. Designing and tuning parallel applications with MPI, particularly at large scale, requires understanding the performance implications of different choices of algorithms ...
Torsten Hoefler, William Gropp, Rajeev Thakur, Jes...