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    BMCBI
    2006
    111views more  BMCBI 2006»
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
    13 years 8 months ago
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
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    Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
    Tomer Hertz, Chen Yanover
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    BMCBI
    2006
    123views more  BMCBI 2006»
    An Automated Method for Rapid Identification of Putative Gene Family Members in Plants
    13 years 8 months ago
    An Automated Method for Rapid Identification of Putative Gene Family Members in Plants
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    Background: Gene duplication events have played a significant role in genome evolution, particularly in plants. Exhaustive searches for all members of a known gene family as well ...
    Ronald L. Frank, Ajay Mane, Fikret Erçal
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    BMCBI
    2006
    133views more  BMCBI 2006»
    Choosing negative examples for the prediction of protein-protein interactions
    13 years 8 months ago
    Choosing negative examples for the prediction of protein-protein interactions
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    The protein-protein interaction networks of even well-studied model organisms are sketchy at best, highlighting the continued need for computational methods to help direct experim...
    Asa Ben-Hur, William Stafford Noble
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    BMCBI
    2006
    117views more  BMCBI 2006»
    Analysis of gene expression changes in relation to toxicity and tumorigenesis in the livers of Big Blue transgenic rats fed comf
    13 years 8 months ago
    Analysis of gene expression changes in relation to toxicity and tumorigenesis in the livers of Big Blue transgenic rats fed comf
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    Background: Comfrey is consumed by humans as a vegetable and a tea, and has been used as an herbal medicine for more than 2000 years. Comfrey, however, is hepatotoxic in livestock...
    Nan Mei, Lei Guo, Lu Zhang 0013, Leming M. Shi, Yo...
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    BMCBI
    2006
    123views more  BMCBI 2006»
    Permutation test for periodicity in short time series data
    13 years 8 months ago
    Permutation test for periodicity in short time series data
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    Background: Periodic processes, such as the circadian rhythm, are important factors modulating and coordinating transcription of genes governing key metabolic pathways. Theoretica...
    Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimbl...
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