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    BMCBI
    2006
    155views more  BMCBI 2006»
    AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
    13 years 8 months ago
    AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
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    Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
    Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
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    BMCBI
    2006
    142views more  BMCBI 2006»
    Improving the Performance of SVM-RFE to Select Genes in Microarray Data
    13 years 8 months ago
    Improving the Performance of SVM-RFE to Select Genes in Microarray Data
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    Background: Recursive Feature Elimination is a common and well-studied method for reducing the number of attributes used for further analysis or development of prediction models. ...
    Yuanyuan Ding, Dawn Wilkins
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    BMCBI
    2006
    130views more  BMCBI 2006»
    MicroTar: predicting microRNA targets from RNA duplexes
    13 years 8 months ago
    MicroTar: predicting microRNA targets from RNA duplexes
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    Background: The accurate prediction of a comprehensive set of messenger RNAs (targets) regulated by animal microRNAs (miRNAs) remains an open problem. In particular, the predictio...
    Rahul Thadani, Martti T. Tammi
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    BMCBI
    2006
    202views more  BMCBI 2006»
    Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
    13 years 8 months ago
    Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
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    Background: The learning of global genetic regulatory networks from expression data is a severely under-constrained problem that is aided by reducing the dimensionality of the sea...
    David J. Reiss, Nitin S. Baliga, Richard Bonneau
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    BMCBI
    2006
    110views more  BMCBI 2006»
    Design of a combinatorial DNA microarray for protein-DNA interaction studies
    13 years 8 months ago
    Design of a combinatorial DNA microarray for protein-DNA interaction studies
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    Background: Discovery of precise specificity of transcription factors is an important step on the way to understanding the complex mechanisms of gene regulation in eukaryotes. Rec...
    Julian Mintseris, Michael B. Eisen
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