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    BMCBI
    2005
    153views more  BMCBI 2005»
    Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
    13 years 8 months ago
    Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
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    Background: Routine application of gene expression microarray technology is rapidly producing large amounts of data that necessitate new approaches of analysis. The analysis of a ...
    Giacomo Finocchiaro, Francesco Mancuso, Heiko M&uu...
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    BMCBI
    2005
    125views more  BMCBI 2005»
    Query3d: a new method for high-throughput analysis of functional residues in protein structures
    13 years 8 months ago
    Query3d: a new method for high-throughput analysis of functional residues in protein structures
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    Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
    Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
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    JCB
    2007
    136views more  JCB 2007»
    A Structure-Based Flexible Search Method for Motifs in RNA
    13 years 8 months ago
    A Structure-Based Flexible Search Method for Motifs in RNA
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    The discovery of non-coding RNA (ncRNA) motifs and their role in regulating gene expression has recently attracted considerable attention. The goal is to discover these motifs in ...
    Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny...
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    BMCBI
    2005
    117views more  BMCBI 2005»
    An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
    13 years 8 months ago
    An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
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    Background: The Gene Ontology Annotation (GOA) database http://www.ebi.ac.uk/GOA aims to provide high-quality supplementary GO annotation to proteins in the UniProt Knowledgebase....
    Evelyn Camon, Daniel Barrell, Emily Dimmer, Vivian...
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    BMCBI
    2005
    132views more  BMCBI 2005»
    CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
    13 years 8 months ago
    CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
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    Background: Protein-protein, protein-DNA and protein-RNA interactions are of central importance in biological systems. Quadrapole Time-of-flight (Q-TOF) mass spectrometry is a sen...
    Yong Tang, Yingfeng Chen, Cheryl F. Lichti, Roger ...
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