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» Differential Algebra and System Modeling in Cellular Biology
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CORR
2004
Springer
142views Education» more  CORR 2004»
13 years 7 months ago
Modeling and Validating Hybrid Systems Using VDM and Mathematica
Hybrid systems are characterized by the hybrid evolution of their state: A part of the state changes discretely, the other part changes continuously over time. Typically, modern c...
Bernhard K. Aichernig, Reinhold Kainhofer
BMCBI
2010
133views more  BMCBI 2010»
13 years 7 months ago
Stability analysis of the GAL regulatory network in Saccharomyces cerevisiae and Kluyveromyces lactis
Background: In the yeast Saccharomyces cerevisiae, interactions between galactose, Gal3p, Gal80p, and Gal4p determine the transcriptional status of the genes required for the gala...
Vishwesh V. Kulkarni, Venkatesh Kareenhalli, Pushk...
BMCBI
2008
154views more  BMCBI 2008»
13 years 7 months ago
Bayesian models and meta analysis for multiple tissue gene expression data following corticosteroid administration
Background: This paper addresses key biological problems and statistical issues in the analysis of large gene expression data sets that describe systemic temporal response cascade...
Yulan Liang, Arpad Kelemen
CMSB
2011
Springer
12 years 7 months ago
The singular power of the environment on stochastic nonlinear threshold Boolean automata networks
Abstract. This paper tackles theoretically the question of the structural stability of biological regulation networks subjected to the influence of their environment. The model of...
Jacques Demongeot, Sylvain Sené
NIPS
2007
13 years 9 months ago
Continuous Time Particle Filtering for fMRI
We construct a biologically motivated stochastic differential model of the neural and hemodynamic activity underlying the observed Blood Oxygen Level Dependent (BOLD) signal in Fu...
Lawrence Murray, Amos J. Storkey