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CIKM
2005
Springer
14 years 2 months ago
Semantic similarity over the gene ontology: family correlation and selecting disjunctive ancestors
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Francisco M. Couto, Mário J. Silva, Pedro C...
BMCBI
2011
13 years 8 days ago
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping
Background: Second generation sequencing technologies yield DNA sequence data at ultra high-throughput. Common to most biological applications is a mapping of the reads to an almo...
Manuel Holtgrewe, Anne-Katrin Emde, David Weese, K...
SAC
2004
ACM
14 years 2 months ago
A new algorithm for gap constrained sequence mining
The sequence mining problem consists in finding frequent sequential patterns in a database of time-stamped events. Several application domains require limiting the maximum tempor...
Salvatore Orlando, Raffaele Perego, Claudio Silves...
WEBI
2004
Springer
14 years 2 months ago
TSSP: A Reinforcement Algorithm to Find Related Papers
Content analysis and citation analysis are two common methods in recommending system. Compared with content analysis, citation analysis can discover more implicitly related papers...
Shen Huang, Gui-Rong Xue, Benyu Zhang, Zheng Chen,...
APWEB
2006
Springer
14 years 12 days ago
Efficient Mining Strategy for Frequent Serial Episodes in Temporal Database
Discovering patterns with great significance is an important problem in data mining discipline. A serial episode is defined to be a partially ordered set of events for consecutive ...
Kuo-Yu Huang, Chia-Hui Chang