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BMCBI
2010
147views more  BMCBI 2010»
13 years 8 months ago
Automatic detection of anchor points for multiple sequence alignment
Background: Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software. This f...
Florian Pitschi, Claudine Devauchelle, Eduardo Cor...
ICDE
2006
IEEE
188views Database» more  ICDE 2006»
14 years 10 months ago
Efficiently Evaluating Order Preserving Similarity Queries over Historical Market-Basket Data
We introduce a new domain-independent framework for formulating and efficiently evaluating similarity queries over historical data, where given a history as a sequence of timestam...
Reza Sherkat, Davood Rafiei
ACSC
2005
IEEE
14 years 2 months ago
Measuring Semantic Similarity in the Taxonomy of WordNet
This paper presents a new model to measure semantic similarity in the taxonomy of WordNet, using edgecounting techniques. We weigh up our model against a benchmark set by human si...
Dongqiang Yang, David M. W. Powers
BMCBI
2011
13 years 3 months ago
Shape-based peak identification for ChIP-Seq
Background: The identification of binding targets for proteins using ChIP-Seq has gained popularity as an alternative to ChIP-chip. Sequencing can, in principle, eliminate artifac...
Valerie Hower, Steven N. Evans, Lior Pachter
BMCBI
2006
111views more  BMCBI 2006»
13 years 8 months ago
Development of an unbiased statistical method for the analysis of unigenic evolution
Background: Unigenic evolution is a powerful genetic strategy involving random mutagenesis of a single gene product to delineate functionally important domains of a protein. This ...
Colleen D. Behrsin, Chris J. Brandl, David W. Litc...