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EMNLP
2009
13 years 6 months ago
2009
Sets of lexical items sharing a significant aspect of their meaning (concepts) are fundamental in linguistics and NLP. Manual concept compilation is labor intensive, error prone a...
IPPS
2007
IEEE
14 years 3 months ago
2007
IEEE
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
BMCBI
2006
13 years 8 months ago
2006
Background: An important class of interaction switches for biological circuits and disease pathways are short binding motifs. However, the biological experiments to find these bin...
BMCBI
2008
13 years 9 months ago
2008
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
GCB
2000
Springer
14 years 13 days ago
2000
Springer
We describe an algorithm for the automatic discovery of recurring patterns in protein structures. The patterns consist of individual residues having a defined order along the prote...