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BMCBI
2008
83views more  BMCBI 2008»
13 years 7 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
FSTTCS
2004
Springer
14 years 10 days ago
Genome Halving Problem Revisited
The Genome Halving Problem is motivated by the whole genome duplication events in molecular evolution that double the gene content of a genome and result in a perfect duplicated ge...
Max A. Alekseyev, Pavel A. Pevzner
GLOBECOM
2006
IEEE
14 years 1 months ago
Toward Understanding the Behavior of BGP During Large-Scale Power Outages
— While the Internet continues to thrive, the resiliency of its fundamental routing infrastructure is not fully understood. In this paper, we analyze the behavior of the de facto...
Jun Li, Zhen Wu, Eric Purpus
JCDL
2009
ACM
127views Education» more  JCDL 2009»
14 years 1 months ago
Finding topic trends in digital libraries
We propose a generative model based on latent Dirichlet allocation for mining distinct topics in document collections by integrating the temporal ordering of documents into the ge...
Levent Bolelli, Seyda Ertekin, Ding Zhou, C. Lee G...
BMCBI
2010
144views more  BMCBI 2010»
13 years 7 months ago
Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
Background: The investigation of plant genome structure and evolution requires comprehensive characterization of repetitive sequences that make up the majority of higher plant nuc...
Petr Novák, Pavel Neumann, Jirí Maca...