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» Discrete Simulations of Biochemical Dynamics
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BIOCOMP
2010
13 years 5 months ago
A Model Reduction Technique for Stochastic Biochemical Kinetics
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
Silvana Ilie, Ekaterina Kudashkina
AMC
2000
94views more  AMC 2000»
13 years 7 months ago
Elements of a theory of simulation II: sequential dynamical systems
We study a class of discrete dynamical systems that is motivated by the generic structure of simulations. The systems consist of the following data: (a) a
Christopher L. Barrett, Henning S. Mortveit, Chris...
MEMBRANE
2004
Springer
14 years 1 months ago
Evolution and Oscillation in P Systems: Applications to Biological Phenomena
Some computational aspects and behavioral patterns of P systems are considered, emphasizing dynamical properties that turn useful in characterizing the behavior of biological and b...
Vincenzo Manca, Luca Bianco, Federico Fontana
CEC
2010
IEEE
13 years 2 months ago
Parameter estimation with term-wise decomposition in biochemical network GMA models by hybrid regularized Least Squares-Particle
High-throughput analytical techniques such as nuclear magnetic resonance, protein kinase phosphorylation, and mass spectroscopic methods generate time dense profiles of metabolites...
Prospero C. Naval, Luis G. Sison, Eduardo R. Mendo...