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» Discriminative Locality Alignment
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CPM
2006
Springer
112views Combinatorics» more  CPM 2006»
14 years 1 months ago
Local Alignment of RNA Sequences with Arbitrary Scoring Schemes
Abstract. Local similarity is an important tool in comparative analysis of biological sequences, and is therefore well studied. In particular, the Smith-Waterman technique and its ...
Rolf Backofen, Danny Hermelin, Gad M. Landau, Oren...
WABI
2009
Springer
128views Bioinformatics» more  WABI 2009»
14 years 4 months ago
A General Framework for Local Pairwise Alignment Statistics with Gaps
We present a novel dynamic programming framework that allows one to compute tight upper bounds for the p-values of gapped local alignments in pseudo–polynomial time. Our algorith...
Pasi Rastas
BMCBI
2004
91views more  BMCBI 2004»
13 years 9 months ago
Improved hit criteria for DNA local alignment
The hit criterion is a key component of heuristic local alignment algorithms. It specifies a class of patterns assumed to witness a potential similarity, and this choice is decisi...
Laurent Noé, Gregory Kucherov
ICCV
2007
IEEE
14 years 11 months ago
Articulated Shape Matching Using Locally Linear Embedding and Orthogonal Alignment
In this paper we propose a method for matching articulated shapes represented as large sets of 3D points by aligning the corresponding embedded clouds generated by locally linear ...
Diana Mateus, Fabio Cuzzolin, Radu Horaud, Edmond ...
CAD
2010
Springer
13 years 9 months ago
Feature aligned quad dominant remeshing using iterative local updates
In this paper we present a new algorithm which turns an unstructured triangle mesh into a quad-dominant mesh with edges well aligned to the principal directions of the underlying ...
Yu-Kun Lai, Leif Kobbelt, Shi-Min Hu