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» Discriminative Locality Alignment
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BMCBI
2008
149views more  BMCBI 2008»
13 years 9 months ago
Evolution of biological sequences implies an extreme value distribution of type I for both global and local pairwise alignment s
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
Olivier Bastien, Eric Maréchal
AVSS
2006
IEEE
14 years 3 months ago
A Smith-Waterman Local Alignment Approach for Spatial Activity Recognition
In this paper we address the spatial activity recognition problem with an algorithm based on Smith-Waterman (SW) local alignment. The proposed SW approach utilises dynamic program...
Daniel E. Riedel, Svetha Venkatesh, Wanquan Liu
TASLP
2008
129views more  TASLP 2008»
13 years 9 months ago
Chroma Binary Similarity and Local Alignment Applied to Cover Song Identification
Abstract--We present a new technique for audio signal comparison based on tonal subsequence alignment and its application to detect cover versions (i.e., different performances of ...
Joan Serrà, Emilia Gómez, Perfecto H...
BMCBI
2005
134views more  BMCBI 2005»
13 years 9 months ago
Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST)
Background: BLAST is one of the most common and useful tools for Genetic Research. This paper describes a software application we have termed Windows .NET Distributed Basic Local ...
Scot E. Dowd, Joaquin Zaragoza, Javier R. Rodrigue...
BMCBI
2010
90views more  BMCBI 2010»
13 years 9 months ago
Local alignment of generalized k-base encoded DNA sequence
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Nils Homer, Stanley F. Nelson, Barry Merriman