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» Distance Patterns in Structural Similarity
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TABLEAUX
2009
Springer
14 years 3 months ago
Comparative Concept Similarity over Minspaces: Axiomatisation and Tableaux Calculus
We study the logic of comparative concept similarity CSL introduced by Sheremet, Tishkovsky, Wolter and Zakharyaschev to capture a form of qualitative similarity comparison. In thi...
Régis Alenda, Nicola Olivetti, Camilla Schw...
JCB
2002
111views more  JCB 2002»
13 years 8 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
DIS
2010
Springer
13 years 7 months ago
Adapted Transfer of Distance Measures for Quantitative Structure-Activity Relationships
Quantitative structure-activity relationships (QSARs) are regression models relating chemical structure to biological activity. Such models allow to make predictions for toxicologi...
Ulrich Rückert, Tobias Girschick, Fabian Buch...
BMCBI
2010
83views more  BMCBI 2010»
13 years 8 months ago
Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Background: Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in...
William P. Kelly, Michael P. H. Stumpf
BMCBI
2006
150views more  BMCBI 2006»
13 years 8 months ago
Protein structure similarity from principle component correlation analysis
Background: Owing to rapid expansion of protein structure databases in recent years, methods of structure comparison are becoming increasingly effective and important in revealing...
Xiaobo Zhou, James Chou, Stephen T. C. Wong