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» Distance Patterns in Structural Similarity
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BMCBI
2006
120views more  BMCBI 2006»
13 years 8 months ago
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
Ryung S. Kim, Hongkai Ji, Wing Hung Wong
RECOMB
2002
Springer
14 years 9 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
IWVF
2001
Springer
14 years 1 months ago
A Skeletal Measure of 2D Shape Similarity
This paper presents a geometric measure that can be used to gauge the similarity of 2D shapes by comparing their skeletons. The measure is defined to be the rate of change of bou...
Andrea Torsello, Edwin R. Hancock
SIGMOD
2009
ACM
269views Database» more  SIGMOD 2009»
14 years 9 months ago
Efficient approximate entity extraction with edit distance constraints
Named entity recognition aims at extracting named entities from unstructured text. A recent trend of named entity recognition is finding approximate matches in the text with respe...
Wei Wang 0011, Chuan Xiao, Xuemin Lin, Chengqi Zha...
ECML
2006
Springer
14 years 10 days ago
Learning Stochastic Tree Edit Distance
Trees provide a suited structural representation to deal with complex tasks such as web information extraction, RNA secondary structure prediction, or conversion of tree structured...
Marc Bernard, Amaury Habrard, Marc Sebban