: In an effort to develop a dielectric screening function for molecular dynamics simulations of biomolecules in implicit solvent, effective dielectric constants (Deff) for a large ...
: Constant dielectric (CD) and distance-dependent dielectric (DDD) functions are the most popular and widespread in the Molecular Mechanics simulations of large molecular systems. ...
Tasks of data mining and information retrieval depend on a good distance function for measuring similarity between data instances. The most effective distance function must be for...
Tasks of information retrieval depend on a good distance function for measuring similarity between data instances. The most effective distance function must be formulated in a con...
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...