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ENTCS
2008
91views more  ENTCS 2008»
13 years 10 months ago
Expressing Priorities and External Probabilities in Process Algebra via Mixed Open/Closed Systems
Defining operational semantics for a process algebra is often based either on labeled transition systems that account for interaction with a context or on the so-called reduction ...
Mario Bravetti
APIN
2006
90views more  APIN 2006»
13 years 10 months ago
AgentTeamwork: Coordinating grid-computing jobs with mobile agents
AgentTeamwork is a grid-computing middleware system that dispatches a collection of mobile agents to coordinate a user job over remote computing nodes in a decentralized manner. I...
Munehiro Fukuda, Koichi Kashiwagi, Shin-ya Kobayas...
BMCBI
2006
114views more  BMCBI 2006»
13 years 10 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
BMCBI
2006
147views more  BMCBI 2006»
13 years 10 months ago
A hidden Markov model approach for determining expression from genomic tiling micro arrays
Background: Genomic tiling micro arrays have great potential for identifying previously undiscovered coding as well as non-coding transcription. To-date, however, analyses of thes...
Kasper Munch, Paul P. Gardner, Peter Arctander, An...
BMCBI
2006
95views more  BMCBI 2006»
13 years 10 months ago
XcisClique: analysis of regulatory bicliques
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
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