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SODA
2003
ACM
158views Algorithms» more  SODA 2003»
15 years 5 months ago
Faster approximation algorithms for the minimum latency problem
We give a 7.18-approximation algorithm for the minimum latency problem that uses only O(n log n) calls to the prize-collecting Steiner tree (PCST) subroutine of Goemans and Willia...
Aaron Archer, David P. Williamson
BMCBI
2010
102views more  BMCBI 2010»
15 years 4 months ago
Identification of recurrent regions of copy-number variants across multiple individuals
Background: Algorithms and software for CNV detection have been developed, but they detect the CNV regions sample-by-sample with individual-specific breakpoints, while common CNV ...
Teo Shu Mei, Agus Salim, Stefano Calza, Ku Chee Se...
BMCBI
2008
130views more  BMCBI 2008»
15 years 4 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
CORR
2010
Springer
152views Education» more  CORR 2010»
15 years 4 months ago
Deploying Wireless Networks with Beeps
Abstract. We present the discrete beeping communication model, which assumes nodes have minimal knowledge about their environment and severely limited communication capabilities. S...
Alejandro Cornejo, Fabian Kuhn
BMCBI
2006
107views more  BMCBI 2006»
15 years 4 months ago
Evaluation of methods for oligonucleotide array data via quantitative real-time PCR
Background: There are currently many different methods for processing and summarizing probelevel data from Affymetrix oligonucleotide arrays. It is of great interest to validate t...
Li-Xuan Qin, Richard P. Beyer, Francesca N. Hudson...