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» Dynamic Factor Graphs for Time Series Modeling
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BMCBI
2010
172views more  BMCBI 2010»
13 years 3 months ago
Nonparametric identification of regulatory interactions from spatial and temporal gene expression data
Background: The correlation between the expression levels of transcription factors and their target genes can be used to infer interactions within animal regulatory networks, but ...
Anil Aswani, Soile V. E. Keränen, James Brown...
PPOPP
2010
ACM
14 years 6 months ago
Scalable communication protocols for dynamic sparse data exchange
Many large-scale parallel programs follow a bulk synchronous parallel (BSP) structure with distinct computation and communication phases. Although the communication phase in such ...
Torsten Hoefler, Christian Siebert, Andrew Lumsdai...
CIKM
2004
Springer
14 years 2 months ago
Node ranking in labeled directed graphs
Our work is motivated by the problem of ranking hyperlinked documents for a given query. Given an arbitrary directed graph with edge and node labels, we present a new flow-based ...
Krishna Prasad Chitrapura, Srinivas R. Kashyap
CVPR
2007
IEEE
14 years 3 months ago
A Graph Reduction Method for 2D Snake Problems
Energy-minimizing active contour models (snakes) have been proposed for solving many computer vision problems such as object segmentation, surface reconstruction, and object track...
Jianhua Yan, Keqi Zhang, Chengcui Zhang, Shu-Ching...
IDEAL
2004
Springer
14 years 2 months ago
Building Genetic Networks for Gene Expression Patterns
Building genetic regulatory networks from time series data of gene expression patterns is an important topic in bioinformatics. Probabilistic Boolean networks (PBNs) have been deve...
Wai-Ki Ching, Eric S. Fung, Michael K. Ng