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» Dynamic programming alignment accuracy
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AAAI
2004
13 years 9 months ago
PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences
Obtaining an accurate multiple alignment of protein sequences is a difficult computational problem for which many heuristic techniques sacrifice optimality to achieve reasonable r...
Chuong B. Do, Michael Brudno, Serafim Batzoglou
IDA
2007
Springer
14 years 1 months ago
Learning to Align: A Statistical Approach
We present a new machine learning approach to the inverse parametric sequence alignment problem: given as training examples a set of correct pairwise global alignments, find the p...
Elisa Ricci, Tijl De Bie, Nello Cristianini
ISVC
2009
Springer
14 years 2 months ago
Deformable 2D Shape Matching Based on Shape Contexts and Dynamic Programming
This paper presents a method for matching closed, 2D shapes (2D object silhouettes) that are represented as an ordered collection of shape contexts [1]. Matching is performed using...
Iasonas Oikonomidis, Antonis A. Argyros
RIDE
1998
IEEE
13 years 12 months ago
Generating Hypermedia Documents from Transcriptions of Television Programs Using Parallel Text Alignment
This paper presents a method of automatically creating hypermedia documents from conventional transcriptions of television programs. Using parallel text alignment techniques, the ...
David C. Gibbon
BMCBI
2008
106views more  BMCBI 2008»
13 years 7 months ago
Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities
Background: Identification of RNA homologs within genomic stretches is difficult when pairwise sequence identity is low or unalignable flanking residues are present. In both cases...
Usman Roshan, Satish Chikkagoudar, Dennis R. Lives...