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» Dynamic sensitivity analysis of biological systems
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RV
2010
Springer
177views Hardware» more  RV 2010»
13 years 6 months ago
Runtime Instrumentation for Precise Flow-Sensitive Type Analysis
We describe a combination of runtime information and static analysis for checking properties of complex and configurable systems. The basic idea of our approach is to 1) let the p...
Etienne Kneuss, Philippe Suter, Viktor Kuncak
PLDI
2010
ACM
14 years 5 months ago
Breadcrumbs: Efficient Context Sensitivity for Dynamic Bug Detection Analyses
Calling context--the set of active methods on the stack--is critical for understanding the dynamic behavior of large programs. Dynamic program analysis tools, however, are almost ...
Michael D. Bond, Graham Z. Baker, Samuel Z. Guyer
GCB
2004
Springer
223views Biometrics» more  GCB 2004»
13 years 11 months ago
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
Michael Beckstette, Dirk Strothmann, Robert Homann...
BMCBI
2010
156views more  BMCBI 2010»
13 years 7 months ago
Adaptive coarse-grained Monte Carlo simulation of reaction and diffusion dynamics in heterogeneous plasma membranes
Background: An adaptive coarse-grained (kinetic) Monte Carlo (ACGMC) simulation framework is applied to reaction and diffusion dynamics in inhomogeneous domains. The presented mod...
Stuart Collins, Michail Stamatakis, Dionisios G. V...
COMPSAC
2003
IEEE
14 years 26 days ago
Sensitivity Analysis of Software Reliability for Component-Based Software Applications
The parameters in these software reliability models are usually directly obtained from the field failure data. Due to the dynamic properties of the system and the insufficiency of...
Jung-Hua Lo, Chin-Yu Huang, Sy-Yen Kuo, Michael R....