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AB
2007
Springer
13 years 11 months ago
Efficient Haplotype Inference with Pseudo-boolean Optimization
Abstract. Haplotype inference from genotype data is a key computational problem in bioinformatics, since retrieving directly haplotype information from DNA samples is not feasible ...
Ana Graça, João Marques-Silva, In&ec...
CSB
2004
IEEE
208views Bioinformatics» more  CSB 2004»
13 years 11 months ago
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
JAPLL
2010
141views more  JAPLL 2010»
13 years 5 months ago
Algebraic tableau reasoning for the description logic SHOQ
Semantic web applications based on the web ontology language (OWL) often require the use of numbers in class descriptions for expressing cardinality restrictions on properties or ...
Jocelyne Faddoul, Volker Haarslev
SIAMNUM
2010
126views more  SIAMNUM 2010»
13 years 2 months ago
Smoothing under Diffeomorphic Constraints with Homeomorphic Splines
In this paper we introduce a new class of diffeomorphic smoothers based on general spline smoothing techniques and on the use of some tools that have been recently developed in th...
Jérémie Bigot, Sébastien Gada...