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BMCBI
2010
163views more  BMCBI 2010»
13 years 7 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
INFOCOM
2003
IEEE
14 years 23 days ago
Associative Search in Peer to Peer Networks: Harnessing Latent Semantics
— The success of a P2P file-sharing network highly depends on the scalability and versatility of its search mechanism. Two particularly desirable search features are scope (abil...
Edith Cohen, Amos Fiat, Haim Kaplan
ER
2006
Springer
145views Database» more  ER 2006»
13 years 11 months ago
Combining Declarative and Procedural Knowledge to Automate and Represent Ontology Mapping
Ontologies on the Semantic Web are by nature decentralized. From the body of ontology mapping approaches, we can draw a conclusion that an effective approach to automate ontology m...
Li Xu, David W. Embley, Yihong Ding
VLDB
2002
ACM
184views Database» more  VLDB 2002»
14 years 7 months ago
Database indexing for large DNA and protein sequence collections
Our aim is to develop new database technologies for the approximate matching of unstructured string data using indexes. We explore the potential of the suffix tree data structure i...
Ela Hunt, Malcolm P. Atkinson, Robert W. Irving
SSDBM
2003
IEEE
141views Database» more  SSDBM 2003»
14 years 22 days ago
The ed-tree: An Index for Large DNA Sequence Databases
The growing interest in genomic research has caused an explosive growth in the size of DNA databases making it increasely challenging to perform searches on them. In this paper, w...
Zhenqiang Tan, Xia Cao, Beng Chin Ooi, Anthony K. ...