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BMCBI
2006
137views more  BMCBI 2006»
13 years 7 months ago
Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
Background: Existing tools for multiple-sequence alignment focus on aligning protein sequence or protein-coding DNA sequence, and are often based on extensions to Needleman-Wunsch...
Rahul Siddharthan
BMCBI
2010
95views more  BMCBI 2010»
13 years 7 months ago
EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results
Background: Accurate prediction of antigenic epitopes is important for immunologic research and medical applications, but it is still an open problem in bioinformatics. The case f...
Shide Liang, Dandan Zheng, Daron M. Standley, Bo Y...
BMCBI
2008
178views more  BMCBI 2008»
13 years 7 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
ICIG
2009
IEEE
14 years 2 months ago
Discriminative Maximum Margin Image Object Categorization with Exact Inference
Categorizing multiple objects in images is essentially a structured prediction problem: the label of an object is in general dependent on the labels of other objects in the image....
Qinfeng Shi, Luping Zhou, Li Cheng, Dale Schuurman...
ISBI
2008
IEEE
14 years 8 months ago
Controlling the error in FMRI: Hypothesis testing or set estimation?
This paper describes a new methodology and associated theoretical analysis for rapid and accurate extraction of activation regions from functional MRI data. Most fMRI data analysi...
Aarti Singh, Rebecca Willett, Robert Nowak, Zachar...