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BMCBI
2010
90views more  BMCBI 2010»
13 years 8 months ago
Using caching and optimization techniques to improve performance of the Ensembl website
Background: The Ensembl web site has provided access to genomic information for almost 10 years. During this time the amount of data available through Ensembl has grown dramatical...
Anne Parker, Eugene Bragin, Simon Brent, Bethan Pr...
BMCBI
2008
128views more  BMCBI 2008»
13 years 8 months ago
Improving the prediction accuracy in classification using the combined data sets by ranks of gene expressions
Background: The information from different data sets experimented under different conditions may be inconsistent even though they are performed with the same research objectives. ...
Ki-Yeol Kim, Dong Hyuk Ki, Hei-Cheul Jeung, Hyun C...
JCST
2008
175views more  JCST 2008»
13 years 8 months ago
Improved Approximate Detection of Duplicates for Data Streams Over Sliding Windows
Detecting duplicates in data streams is an important problem that has a wide range of applications. In general, precisely detecting duplicates in an unbounded data stream is not fe...
Hong Shen, Yu Zhang
BMCBI
2005
114views more  BMCBI 2005»
13 years 8 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
SIGMOD
2008
ACM
142views Database» more  SIGMOD 2008»
14 years 8 months ago
Cost-based variable-length-gram selection for string collections to support approximate queries efficiently
Approximate queries on a collection of strings are important in many applications such as record linkage, spell checking, and Web search, where inconsistencies and errors exist in...
Xiaochun Yang, Bin Wang, Chen Li