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PODS
2001
ACM
145views Database» more  PODS 2001»
14 years 7 months ago
Optimization of Sequence Queries in Database Systems
The need to search for complex and recurring patterns in database sequences is shared by many applications. In this paper, we discuss how to express and support efficiently sophis...
Reza Sadri, Carlo Zaniolo, Amir M. Zarkesh, Jafar ...
ICIP
2002
IEEE
14 years 9 months ago
Retrieval of 3D protein structures
A protein molecule is made of a long chain of amino acid sequences that fold into a complex three-dimensional structure. It is often the geometrical shapes that determine the prot...
Shann-Ching Chen, Tsuhan Chen
SDM
2008
SIAM
161views Data Mining» more  SDM 2008»
13 years 9 months ago
Efficient Maximum Margin Clustering via Cutting Plane Algorithm
Maximum margin clustering (MMC) is a recently proposed clustering method, which extends the theory of support vector machine to the unsupervised scenario and aims at finding the m...
Bin Zhao, Fei Wang, Changshui Zhang
SIGMOD
2004
ACM
182views Database» more  SIGMOD 2004»
14 years 7 months ago
Efficient set joins on similarity predicates
In this paper we present an efficient, scalable and general algorithm for performing set joins on predicates involving various similarity measures like intersect size, Jaccard-coe...
Sunita Sarawagi, Alok Kirpal
BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...