Sciweavers

706 search results - page 17 / 142
» Efficient Algorithms for k -Disjoint Paths Problems on DAGs
Sort
View
TCBB
2008
113views more  TCBB 2008»
13 years 7 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
BIBE
2007
IEEE
174views Bioinformatics» more  BIBE 2007»
14 years 1 months ago
Shortest Path Approaches for the Longest Common Subsequence of a Set of Strings
—We investigate the k-LCS problem that is finding a longest common subsequence (LCS) for k given input strings. The problem is known to have practical solutions for k = 2, but f...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
STACS
2010
Springer
14 years 2 months ago
Log-space Algorithms for Paths and Matchings in k-trees
Reachability and shortest path problems are NL-complete for general graphs. They are known to be in L for graphs of tree-width 2 [14]. However, for graphs of treewidth larger than ...
Bireswar Das, Samir Datta, Prajakta Nimbhorkar
SIGMOD
2004
ACM
121views Database» more  SIGMOD 2004»
14 years 7 months ago
An Optimal Algorithm for Querying Tree Structures and its Applications in Bioinformatics
Trees and graphs are widely used to model biological databases. Providing efficient algorithms to support tree-based or graph-based querying is therefore an important issue. In th...
Hsiao-Fei Liu, Ya-Hui Chang, Kun-Mao Chao
CORR
2010
Springer
98views Education» more  CORR 2010»
13 years 7 months ago
Efficient Sketches for the Set Query Problem
We develop an algorithm for estimating the values of a vector x Rn over a support S of size k from a randomized sparse binary linear sketch Ax of size O(k). Given Ax and S, we ca...
Eric Price