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BIOCOMP
2007
13 years 10 months ago
xMAN: extreme MApping of oligoNucleotides
Background: The ability to rapidly map millions of oligonucleotide fragments to a reference genome is crucial to many high throughput genomic technologies. Results: We propose an ...
Wei Li, Jason S. Carroll, Myles Brown, X. Shirley ...
CSE
2009
IEEE
13 years 9 months ago
Efficient Translation of Algorithmic Kernels on Large-Scale Multi-cores
In this paper we present the design of a novel embedded processor architecture (which we call a
Amit Pande, Joseph Zambreno
BMCBI
2010
111views more  BMCBI 2010»
13 years 8 months ago
Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays
Background: Current commercial high-density oligonucleotide microarrays can hold millions of probe spots on a single microscopic glass slide and are ideal for studying the transcr...
Hedda Høvik, Tsute Chen
IPPS
1999
IEEE
14 years 26 days ago
Optimally Scaling Permutation Routing on Reconfigurable Linear Arrays with Optical Buses
We present an optimal and scalable permutation routing algorithm for three reconfigurable models based on linear arrays that allow pipelining of information through an optical bus...
Jerry L. Trahan, Anu G. Bourgeois, Ramachandran Va...
IFIP
2003
Springer
14 years 1 months ago
Collaborative and Distributed Computation in Mesh-Like Wireless Sensor Arrays
Sensor networks are being used for implementation of a large number of applications involving distributed and collaborative computation. Extensive research has focused upon design ...
Mitali Singh, Viktor K. Prasanna, José D. P...