Mining frequent trees is very useful in domains like bioinformatics, web mining, mining semi-structured data, and so on. We formulate the problem of mining (embedded) subtrees in ...
Abstract In this paper we introduce the Weighted Suffix Tree, an efficient data structure for computing string regularities in weighted sequences of molecular data. Molecular Wei...
Costas S. Iliopoulos, Christos Makris, Yannis Pana...
Tree structures are useful for describing and analyzing biological objects and processes. Consequently, there is a need to design metrics and algorithms to compare trees. A natura...
Various forms of multicut problems are of great importance in the area of network design. In general, these problems are intractable. However, several parameters have been identifi...
We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent wi...