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BMCBI
2010
189views more  BMCBI 2010»
13 years 9 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
PVLDB
2008
126views more  PVLDB 2008»
13 years 8 months ago
Parallelizing query optimization
Many commercial RDBMSs employ cost-based query optimization exploiting dynamic programming (DP) to efficiently generate the optimal query execution plan. However, optimization tim...
Wook-Shin Han, Wooseong Kwak, Jinsoo Lee, Guy M. L...
PPOPP
2009
ACM
14 years 9 months ago
Exploiting global optimizations for openmp programs in the openuh compiler
The advent of new parallel architectures has increased the need for parallel optimizing compilers to assist developers in creating efficient code. OpenUH is a state-of-the-art opt...
Lei Huang, Deepak Eachempati, Marcus W. Hervey, Ba...
IPPS
2007
IEEE
14 years 3 months ago
A Study of Design Efficiency with a High-Level Language for FPGAs
Over the years reconfigurable computing devices such as FPGAs have evolved from gate-level glue logic to complex reprogrammable processing architectures. However, the tools used f...
Zain-ul-Abdin, Bertil Svensson
IPPS
1999
IEEE
14 years 1 months ago
Addressing Real-Time Requirements of Automatic Vehicle Guidance with MMX Technology
Abstract. This paper describes a study concerning the impact of MMX technology in the field of automatic vehicle guidance. Due to the high speed a vehicle can reach, this applicati...
Massimo Bertozzi, Alberto Broggi, Alessandra Fasci...