48 search results - page 3 / 10 » Efficient Constrained Multiple Sequence Alignment with Perfo... |
BIBM
2007
IEEE
14 years 2 months ago
2007
IEEE
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
BMCBI
2008
13 years 7 months ago
2008
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
BMCBI
2008
13 years 7 months ago
2008
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
SAC
2009
ACM
14 years 2 months ago
2009
ACM
Signal finding (pattern discovery) in biological sequences is a fundamental problem in both computer science and molecular biology. Many approaches have been proposed for extract...
IWANN
2009
Springer
14 years 2 months ago
2009
Springer
Abstract. This paper proposes a novel algorithm for complete exact patternmatching focusing the specificities of protein sequences (alphabet of 20 symbols) but, also highly efficie...