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BMCBI
2006
120views more  BMCBI 2006»
13 years 8 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
IPPS
2010
IEEE
13 years 5 months ago
Head-body partitioned string matching for Deep Packet Inspection with scalable and attack-resilient performance
Abstract--Dictionary-based string matching (DBSM) is a critical component of Deep Packet Inspection (DPI), where thousands of malicious patterns are matched against high-bandwidth ...
Yi-Hua E. Yang, Viktor K. Prasanna, Chenqian Jiang
EUROGRAPHICS
2010
Eurographics
14 years 4 months ago
Fast Ray Sorting and Breadth-First Packet Traversal for GPU Ray Tracing
We present a novel approach to ray tracing execution on commodity graphics hardware using CUDA. We decompose a standard ray tracing algorithm into several data-parallel stages tha...
Kirill Garanzha and Charles Loop
CCGRID
2004
IEEE
13 years 11 months ago
Evolutionary molecular structure determination using Grid-enabled data mining
A new computational framework is developed for the evolutionary determination of molecular crystal structures using the Shake-and-Bake methodology. Genetic algorithms are performe...
Mark L. Green, Russ Miller
SPAA
2010
ACM
13 years 8 months ago
A universal construction for wait-free transaction friendly data structures
Given the sequential implementation of any data structure, we show how to obtain an efficient, wait-free implementation of that data structure shared by any fixed number of proces...
Phong Chuong, Faith Ellen, Vijaya Ramachandran