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» Efficient Seeding Techniques for Protein Similarity Search
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PAA
2006
13 years 7 months ago
Efficient median based clustering and classification techniques for protein sequences
Abstract In this paper, an efficient K-medians clustering (unsupervised) algorithm for prototype selection and Supervised K-medians (SKM) classification technique for protein seque...
P. A. Vijaya, M. Narasimha Murty, D. K. Subramania...
ML
2008
ACM
128views Machine Learning» more  ML 2008»
13 years 7 months ago
QG/GA: a stochastic search for Progol
Most search techniques within ILP require the evaluation of a large number of inconsistent clauses. However, acceptable clauses typically need to be consistent, and are only found ...
Stephen Muggleton, Alireza Tamaddoni-Nezhad
SIGMOD
2006
ACM
125views Database» more  SIGMOD 2006»
14 years 8 months ago
A non-linear dimensionality-reduction technique for fast similarity search in large databases
To enable efficient similarity search in large databases, many indexing techniques use a linear transformation scheme to reduce dimensions and allow fast approximation. In this re...
Khanh Vu, Kien A. Hua, Hao Cheng, Sheau-Dong Lang
BMCBI
2010
205views more  BMCBI 2010»
13 years 8 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
ICDE
2006
IEEE
239views Database» more  ICDE 2006»
14 years 1 months ago
Grid Representation for Efficient Similarity Search in Time Series Databases
Widespread interest in time-series similarity search has made more in need of efficient technique, which can reduce dimensionality of the data and then to index it easily using a ...
Guifang Duan, Yu Suzuki, Kyoji Kawagoe