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» Efficient Seeding Techniques for Protein Similarity Search
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RECOMB
2005
Springer
14 years 8 months ago
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Abstract. The interpretation of large-scale protein network data depends on our ability to identify significant sub-structures in the data, a computationally intensive task. Here w...
Jacob Scott, Trey Ideker, Richard M. Karp, Roded S...
ICDE
2010
IEEE
268views Database» more  ICDE 2010»
14 years 7 months ago
Techniques for Efficiently Searching in Spatial, Temporal, Spatio-temporal, and Multimedia Databases
This tutorial provides a comprehensive and comparative overview of general techniques to efficiently support similarity queries in spatial, temporal, spatio-temporal, and multimedi...
Hans-Peter Kriegel, Matthias Renz, Peer Kröge...
IJCSA
2006
129views more  IJCSA 2006»
13 years 7 months ago
The SH-Tree: A Novel and Flexible Super Hybrid Index Structure for Similarity Search on Multidimensional Data
Approaches to indexing and searching feature vectors are an indispensable factor to support similarity search effectively and efficiently. Such feature vectors extracted from real...
Tran Khanh Dang
ISMB
1997
13 years 9 months ago
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
Amit Pal Singh, Douglas L. Brutlag
CIKM
2006
Springer
13 years 11 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...