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BMCBI
2006
129views more  BMCBI 2006»
13 years 7 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
IJCIA
2006
88views more  IJCIA 2006»
13 years 7 months ago
Multi-Learner Based Recursive Supervised Training
In this paper, we propose the Multi-Learner Based Recursive Supervised Training (MLRT) algorithm which uses the existing framework of recursive task decomposition, by training the...
Laxmi R. Iyer, Kiruthika Ramanathan, Sheng Uei Gua...
BMCBI
2008
228views more  BMCBI 2008»
13 years 7 months ago
Adaptive diffusion kernel learning from biological networks for protein function prediction
Background: Machine-learning tools have gained considerable attention during the last few years for analyzing biological networks for protein function prediction. Kernel methods a...
Liang Sun, Shuiwang Ji, Jieping Ye
PAMI
2007
171views more  PAMI 2007»
13 years 7 months ago
Toward Objective Evaluation of Image Segmentation Algorithms
—Unsupervised image segmentation is an important component in many image understanding algorithms and practical vision systems. However, evaluation of segmentation algorithms thu...
Ranjith Unnikrishnan, Caroline Pantofaru, Martial ...
ICML
2008
IEEE
14 years 8 months ago
Sequence kernels for predicting protein essentiality
The problem of identifying the minimal gene set required to sustain life is of crucial importance in understanding cellular mechanisms and designing therapeutic drugs. This work d...
Cyril Allauzen, Mehryar Mohri, Ameet Talwalkar