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» Efficient Variants of the Backward-Oracle-Matching Algorithm
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JMLR
2010
136views more  JMLR 2010»
13 years 3 months ago
Approximate Riemannian Conjugate Gradient Learning for Fixed-Form Variational Bayes
Variational Bayesian (VB) methods are typically only applied to models in the conjugate-exponential family using the variational Bayesian expectation maximisation (VB EM) algorith...
Antti Honkela, Tapani Raiko, Mikael Kuusela, Matti...
COLT
2008
Springer
13 years 10 months ago
More Efficient Internal-Regret-Minimizing Algorithms
Standard no-internal-regret (NIR) algorithms compute a fixed point of a matrix, and hence typically require O(n3 ) run time per round of learning, where n is the dimensionality of...
Amy R. Greenwald, Zheng Li, Warren Schudy
IPL
2008
95views more  IPL 2008»
13 years 8 months ago
Efficient algorithms for finding interleaving relationship between sequences
The longest common subsequence and sequence alignment problems have been studied extensively and they can be regarded as the relationship measurement between sequences. However, m...
Kuo-Si Huang, Chang-Biau Yang, Kuo-Tsung Tseng, Hs...
TCBB
2008
113views more  TCBB 2008»
13 years 8 months ago
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays
The representation of a genome by oligonucleotide probes is a prerequisite for the analysis of many of its basic properties, such as transcription factor binding sites, chromosomal...
Alexander Schliep, Roland Krause
RECOMB
2008
Springer
14 years 9 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg