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» Efficient algorithms for minimizing tree pattern queries
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BIBM
2008
IEEE
112views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Fast Alignments of Metabolic Networks
Network alignments are extensively used for comparing, exploring, and predicting biological networks. Existing alignment tools are mostly based on isomorphic and homeomorphic embe...
Qiong Cheng, Piotr Berman, Robert W. Harrison, Ale...
ANCS
2006
ACM
13 years 11 months ago
Efficient memory utilization on network processors for deep packet inspection
Deep Packet Inspection (DPI) refers to examining both packet header and payload to look for predefined patterns, which is essential for network security, intrusion detection and c...
Piti Piyachon, Yan Luo
VLDB
2004
ACM
127views Database» more  VLDB 2004»
14 years 8 months ago
Querying high-dimensional data in single-dimensional space
In this paper, we propose a new tunable index scheme, called iMinMax(), that maps points in highdimensional spaces to single-dimensional values determined by their maximum or minim...
Cui Yu, Stéphane Bressan, Beng Chin Ooi, Kian-Lee...
ISMB
1994
13 years 9 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe
TVCG
2010
165views more  TVCG 2010»
13 years 2 months ago
Binary Mesh Partitioning for Cache-Efficient Visualization
Abstract--One important bottleneck when visualizing large data sets is the data transfer between processor and memory. Cacheaware (CA) and cache-oblivious (CO) algorithms take into...
Marc Tchiboukdjian, Vincent Danjean, Bruno Raffin