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JCSS
2002
95views more  JCSS 2002»
13 years 10 months ago
Efficient algorithms for multichromosomal genome rearrangements
Hannenhalli and Pevzner [5] gave a polynomial time algorithm for computing the minimum number of reversals, translocations, fissions, and fusions, that would transform one multichr...
Glenn Tesler
BMCBI
2006
192views more  BMCBI 2006»
13 years 11 months ago
Analysis of circular genome rearrangement by fusions, fissions and block-interchanges
Background: Analysis of genomes evolving via block-interchange events leads to a combinatorial problem of sorting by block-interchanges, which has been studied recently to evaluat...
Chin Lung Lu, Yen-Lin Huang, Tsui Ching Wang, Hsie...
JCB
2007
78views more  JCB 2007»
13 years 10 months ago
Sorting by Reciprocal Translocations via Reversals Theory
The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of genome...
Michal Ozery-Flato, Ron Shamir
RECOMB
2005
Springer
14 years 11 months ago
On Sorting by Translocations
The study of genome rearrangements is an important tool in comparative genomics. This paper revisits the problem of sorting a multichromosomal genome by translocations, i.e. exchan...
Anne Bergeron, Julia Mixtacki, Jens Stoye
RECOMB
2010
Springer
13 years 8 months ago
A New Genomic Evolutionary Model for Rearrangements, Duplications, and Losses That Applies across Eukaryotes and Prokaryotes
Background: Genomic rearrangements have been studied since the beginnings of modern genetics and models for such rearrangements have been the subject of many papers over the last ...
Yu Lin, Bernard M. E. Moret