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IPPS
2009
IEEE
15 years 10 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
TPDS
1998
129views more  TPDS 1998»
15 years 3 months ago
The Offset Cube: A Three-Dimensional Multicomputer Network Topology Using Through-Wafer Optics
—Three-dimensional packaging technologies are critical for enabling ultra-compact, massively parallel processors (MPPs) for embedded applications. Through-wafer optical interconn...
W. Stephen Lacy, José Cruz-Rivera, D. Scott...
FLAIRS
2004
15 years 5 months ago
Improved Situation Interpretation Metrics in Context-Based Reasoning Simulations
The current implementation of situation interpretation metrics (SIMs) in context-based reasoning (CxBR) simulations makes it difficult to effectively and efficiently characterize ...
Roberto Sánchez, Avelino J. Gonzalez
MTV
2006
IEEE
97views Hardware» more  MTV 2006»
15 years 10 months ago
Circuit Profiling Mechanisms for High-Level {ATPG}
—Our Mutation-based Validation Paradigm (MVP) is a validation environment for high-level microprocessor implementations. To be able to efficiently generate test sequences, we nee...
Jorge Campos, Hussain Al-Asaad
CPHYSICS
2008
62views more  CPHYSICS 2008»
15 years 3 months ago
Trial wave functions for high-pressure metallic hydrogen
Many body trial wave functions are the key ingredient for accurate Quantum Monte Carlo estimates of total electronic energies in many electron systems. In the Coupled Electron-Ion...
Carlo Pierleoni, Kris T. Delaney, Miguel A. Morale...