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GD
2008
Springer
13 years 10 months ago
Rapid Multipole Graph Drawing on the GPU
Abstract. As graphics processors become powerful, ubiquitous and easier to program, they have also become more amenable to general purpose high-performance computing, including the...
Apeksha Godiyal, Jared Hoberock, Michael Garland, ...
FMICS
2010
Springer
13 years 9 months ago
Correctness of Sensor Network Applications by Software Bounded Model Checking
We investigate the application of the software bounded model checking tool CBMC to the domain of wireless sensor networks (WSNs). We automatically generate a software behavior mode...
Frank Werner, David Faragó
HPDC
2008
IEEE
13 years 9 months ago
Code coverage, performance approximation and automatic recognition of idioms in scientific applications
Basic data flow patterns which we call idioms, such as stream, transpose, reduction, random access and stencil, are common in scientific numerical applications. We hypothesize tha...
Jiahua He, Allan Snavely, Rob F. Van der Wijngaart...
BMCBI
2008
116views more  BMCBI 2008»
13 years 9 months ago
GBParsy: A GenBank flatfile parser library with high speed
Background: GenBank flatfile (GBF) format is one of the most popular sequence file formats because of its detailed sequence features and ease of readability. To use the data in th...
Tae-Ho Lee, Yeon-Ki Kim, Baek Hie Nahm
BMCBI
2008
163views more  BMCBI 2008»
13 years 9 months ago
ProfileGrids as a new visual representation of large multiple sequence alignments: a case study of the RecA protein family
Background: Multiple sequence alignments are a fundamental tool for the comparative analysis of proteins and nucleic acids. However, large data sets are no longer manageable for v...
Alberto I. Roca, Albert E. Almada, Aaron C. Abajia...