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BMCBI
2011
12 years 11 months ago
Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence
Background: Alternative splicing of pre-mature RNA is an important process eukaryotes utilize to increase their repertoire of different protein products. Several types of differen...
Holger Pillmann, Klas Hatje, Florian Odronitz, Bjo...
KDD
2007
ACM
167views Data Mining» more  KDD 2007»
14 years 8 months ago
Generalized component analysis for text with heterogeneous attributes
We present a class of richly structured, undirected hidden variable models suitable for simultaneously modeling text along with other attributes encoded in different modalities. O...
Xuerui Wang, Chris Pal, Andrew McCallum
BMCBI
2011
12 years 11 months ago
A Simple Approach to Ranking Differentially Expressed Gene Expression Time Courses through Gaussian Process Regression
Background: The analysis of gene expression from time series underpins many biological studies. Two basic forms of analysis recur for data of this type: removing inactive (quiet) ...
Alfredo A. Kalaitzis, Neil D. Lawrence
MICCAI
2009
Springer
14 years 7 months ago
Lung Extraction, Lobe Segmentation and Hierarchical Region Assessment for Quantitative Analysis on High Resolution Computed Tomo
Abstract. Regional assessment of lung disease (such as chronic obstructive pulmonary disease) is a critical component to accurate patient diagnosis. Software tools than enable such...
James C. Ross, Raúl San José Est&eac...
ISSTA
2004
ACM
14 years 29 days ago
Faster constraint solving with subtypes
Constraints in predicate or relational logic can be translated into boolean logic and solved with a SAT solver. For faster solving, it is common to exploit the typing of predicate...
Jonathan Edwards, Daniel Jackson, Emina Torlak, Vi...