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BMCBI
2008
154views more  BMCBI 2008»
13 years 10 months ago
GenomeMatcher: A graphical user interface for DNA sequence comparison
Background: The number of available genome sequences is increasing, and easy-to-use software that enables efficient comparative analysis is needed. Results: We developed GenomeMat...
Yoshiyuki Ohtsubo, Wakako Ikeda-Ohtsubo, Yuji Naga...
BMCBI
2008
211views more  BMCBI 2008»
13 years 10 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
CORR
2010
Springer
119views Education» more  CORR 2010»
13 years 10 months ago
Report on the XBase Project
This project addressed the conceptual fundamentals of data storage, investigating techniques for provision of highly generic storage facilities that can be tailored to produce var...
Evangelos Zirintsis, Graham N. C. Kirby, Alan Dear...
DEBU
2008
136views more  DEBU 2008»
13 years 10 months ago
Towards a Unified Declarative and Imperative XQuery Processor
Since the birth of XML, the processing of XML query languages like XQuery/XQueryP has been widely researched in the academic and industrial communities. Most of the approaches con...
Zhen Hua Liu, Anguel Novoselsky, Vikas Arora
BMCBI
2006
116views more  BMCBI 2006»
13 years 10 months ago
JColorGrid: software for the visualization of biological measurements
Background: Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations hav...
Marcin P. Joachimiak, Jennifer L. Weissman, Barnab...