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ESA
2008
Springer
106views Algorithms» more  ESA 2008»
13 years 10 months ago
An Experimental Analysis of Robinson-Foulds Distance Matrix Algorithms
In this paper, we study two fast algorithms--HashRF and PGM-Hashed--for computing the Robinson-Foulds (RF) distance matrix between a collection of evolutionary trees. The RF distan...
Seung-Jin Sul, Tiffani L. Williams
GECCO
2006
Springer
127views Optimization» more  GECCO 2006»
14 years 11 days ago
Multiobjective genetic algorithms for multiscaling excited state direct dynamics in photochemistry
This paper studies the effectiveness of multiobjective genetic and evolutionary algorithms in multiscaling excited state direct dynamics in photochemistry via rapid reparameteriza...
Kumara Sastry, D. D. Johnson, Alexis L. Thompson, ...
BIOINFORMATICS
2002
100views more  BIOINFORMATICS 2002»
13 years 8 months ago
Optimal algorithms for local vertex quartet cleaning
Reconstructing evolutionary trees is an important problem in biology. A response to the computational intractability of most of the traditional criteria for inferring evolutionary...
Gianluca Della Vedova, Todd Wareham
GECCO
2005
Springer
129views Optimization» more  GECCO 2005»
14 years 2 months ago
Morphing methods in evolutionary design optimization
Design optimization is a well established application field of evolutionary computation. However, standard recombination operators acting on the genotypic representation of the d...
Michael Nashvili, Markus Olhofer, Bernhard Sendhof...
EMO
2005
Springer
194views Optimization» more  EMO 2005»
14 years 2 months ago
An EMO Algorithm Using the Hypervolume Measure as Selection Criterion
Abstract. The hypervolume measure is one of the most frequently applied measures for comparing the results of evolutionary multiobjective optimization algorithms (EMOA). The idea t...
Michael Emmerich, Nicola Beume, Boris Naujoks