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BMCBI
2006
93views more  BMCBI 2006»
13 years 9 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
EOR
2006
135views more  EOR 2006»
13 years 9 months ago
Principles of scatter search
Scatter search is an evolutionary method that has been successfully applied to hard optimization problems. The fundamental concepts and principles of the method were first propose...
Rafael Martí, Manuel Laguna, Fred Glover
AO
2005
147views more  AO 2005»
13 years 9 months ago
Domain modelling and NLP: Formal ontologies? Lexica? Or a bit of both?
There are a number of genuinely open questions concerning the use of domain models in nlp. It would be great if contributors to Applied Ontology could help addressing them rather ...
Massimo Poesio
BMCBI
2005
162views more  BMCBI 2005»
13 years 9 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
CORR
2004
Springer
180views Education» more  CORR 2004»
13 years 9 months ago
Self-Organized Stigmergic Document Maps: Environment as a Mechanism for Context Learning
Social insect societies and more specifically ant colonies, are distributed systems that, in spite of the simplicity of their individuals, present a highly structured social organi...
Vitorino Ramos, Juan J. Merelo Guervós