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TWC
2010
13 years 2 months ago
Dual-hop adaptive packet transmission systems with regenerative relaying
We propose and analyze two different approaches for performing adaptive modulation and coding (AMC) in dualhop transmission systems, where a source node S communicates with a certa...
Andreas Müller 0001, Hong-Chuan Yang
BMCBI
2011
13 years 2 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
FCCM
2011
IEEE
241views VLSI» more  FCCM 2011»
12 years 11 months ago
Multilevel Granularity Parallelism Synthesis on FPGAs
— Recent progress in High-Level Synthesis (HLS) es has helped raise the abstraction level of FPGA programming. However implementation and performance evaluation of the HLS-genera...
Alexandros Papakonstantinou, Yun Liang, John A. St...
BMCBI
2011
12 years 11 months ago
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
Background: With next-generation sequencing technologies, experiments that were considered prohibitive only a few years ago are now possible. However, while these technologies hav...
Osvaldo Zagordi, Arnab Bhattacharya, Nicholas Erik...
BMCBI
2011
12 years 11 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes